Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs7566076 chr2:19950864 G/T 2.21E-12 111 17.78 14.13 0 KM Plot
LAML rs75776386 chr6:34465215 G/A 0.000168 106 16.27 8.1 0 KM Plot
LAML rs75796363 chr19:33925533 G/A 1.9E-5 111 16.77 10.67 3 KM Plot
LAML rs75800244 chr6:134267876 C/T 0.000125 106 16.3 8.1 1 KM Plot
LAML rs758165 chr12:1949234 C/A 0.00017 107 0 20.27 12.2 KM Plot
LAML rs75832365 chr13:71346966 C/CAT 1.89E-5 110 0 5 16.27 KM Plot
LAML rs7587496 chr2:238387632 A/G 0.000127 109 12.65 21.32 0 KM Plot
LAML rs7589096 chr2:127422593 C/T 0.000153 111 15.23 13.1 0 KM Plot
LAML rs75940257 chr16:15978958 T/G 0.000171 110 16.23 13.1 0 KM Plot
LAML rs7594644 chr2:39206456 A/C 0.000136 111 0 4.52 16.27 KM Plot
LAML rs7597905 chr2:127422910 T/C 0.000153 111 15.23 13.1 0 KM Plot
LAML rs76026631 chr20:61614961 G/A 0.000155 107 12.17 23.3 0 KM Plot
LAML rs76032537 chr1:95391570 A/G 9.48E-5 111 13.1 22.83 0 KM Plot
LAML rs76128300 chr7:135673129 A/G 7.93E-5 110 13.2 28.93 0 KM Plot
LAML rs76205198 chr7:135611085 T/TAA 8.34E-5 110 13.1 27.93 0 KM Plot